The National Center for Genome Analysis Support (Links to an external site.) (NCGAS) provides this workshop which includes discussions, lectures, and hands-on tutorials to cover topics important to constructing and analyzing shotgun sequenced metagenomic datasets.
Material covers availability of HPC resources, how to access these resources, while learning how to assemble and annotate metagenomics datasets. The goal of this workshop is to provide a comprehensive preparation for metagenomic analysis and other bioinformatic tasks. While the material makes heavy use of XSEDE and IU machines, the material is transferable to any cluster.